Open source · Human–agent collaboration
Pipal
A persistent layer for Pi agents: identity, memory, topic-based sessions, messaging, and delegation between agents.
View on GitHubMachine learning · Comp neuro · Applied AI
I build intelligent systems where people and AI work well together—from scientific models to practical agent tools.
I work across scientific machine learning, applied AI, and agentic systems. During my PhD, I focused on the application of machine learning in computational neuroscience, using deep neural networks, latent variable models, and implicit neural representations to better understand the visual system.
At Noselab, I work on data-driven medicine: analyzing clinical data for biomarker discovery, building reproducible analytical pipelines, and developing AI workflows that help people navigate scientific evidence and internal knowledge.
Outside work, I build tools around human–AI collaboration and explore how people can work with agents and be more productive without giving up control and understanding. I like turning complex ideas into practical tools and learning from how people actually use them.
Want to compare notes or work on something together? Find a time to chat or send me an email.
Open source · Human–agent collaboration
A persistent layer for Pi agents: identity, memory, topic-based sessions, messaging, and delegation between agents.
View on GitHubOpen source · Developer tools
A local, PR-style review workflow for AI-assisted development. Comment on exact diff lines and work through feedback with an agent.
View on GitHubAt Noselab
Analysis of clinical data for biomarker discovery, agentic literature workflows, and an internal assistant for exploring the team’s knowledge base.
About NoselabOpen source · Visual neuroscience
A Python package born from work on learning and aligning single-neuron invariances in visual cortex.
View on GitHubNeurIPS competition · Visual neuroscience
A competition on predicting large-scale mouse primary visual cortex activity.
View on GitHubMohammad Bashiri*, Luca Baroni*, Ján Antolík, Fabian H. Sinz
Konstantin-Klemens Lurz*, Mohammad Bashiri*, Edgar Y. Walker, Fabian H. Sinz
Luca Baroni*, Mohammad Bashiri*, Konstantin Friedrich Willeke, Ján Antolík, Fabian H. Sinz
Konstantin F. Willeke*, Paul G. Fahey*, Mohammad Bashiri, Laura Pede, Max F. Burg, Christoph Blessing, Santiago A. Cadena, Zhiwei Ding, Konstantin-Klemens Lurz, Kayla Ponder, Taliah Muhammad, Saumil S. Patel, Alexander S. Ecker, Andreas S. Tolias, Fabian H. Sinz
Mohammad Bashiri*, Edgar Walker*, Konstantin-Klemens Lurz, Akshay Jagadish, Taliah Muhammad, Zhiwei Ding, Zhuokun Ding, Andreas Tolias, Fabian Sinz
Konstantin-Klemens Lurz, Mohammad Bashiri, Konstantin Willeke, Akshay Jagadish, Eric Wang, Edgar Y. Walker, Santiago A Cadena, Taliah Muhammad, Erick Cobos, Andreas S. Tolias, Alexander S Ecker, Fabian H. Sinz
* Equal contribution. See all publications on Google Scholar ↗
Feb 2025
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Invited lecture · MPI for Evolutionary Anthropology, Leipzig
Organizer · Collaborative ML in neuroscience, iBehave, Bonn
Workshop organizer · Bernstein Conference, Berlin
Guest expert · Breathing Minds, online
Invited speaker · German Primate Center, Göttingen
Lead instructor · iBOTS workshop
Lead instructor · iBOTS workshop
Crash course · Co-instructor with Arne Nix
Teaching assistant · University course
Student supervisor · University seminar
Teaching assistant · University course